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You can use herbicides to prevent roots from growing without killing the tree itself, however they must be used with caution. Systemic herbicides are absorbed by the root and can kill off problematic roots. However, herbicides can sometimes negatively impact nearby plants, so the solution is best used sparingly.

Tree experts don’t advise against digging through tree roots, but instead encourage caution and consultation with a local arborist to make sure you don’t damage the tree’s structure or interrupt its water or nutrient intake. An arborist can recommend specific practices when digging and help prune the roots or dig a trench for utilities with a tool that can remove soil without touching the tree’s roots.

In most cases, leaving tree roots underground is not a problem if the stump has been removed or ground below the soil. However, some larger roots may decompose, leaving dents in your soil. Additionally, some aggressive trees, including willows, oaks, elms, maples, and poplars may grow back from roots. Large aggressive trees with established root systems are more likely to grow back.

If it’s only a smaller branch that has died and you’re keeping an eye on the tree, it’s probably nothing to worry about. But if other nearby branches start dying off as well, or a very large branch dies, then you likely have a bigger problem. It’s time to watch for diseases and other problems and possibly get professional guidance on how to proceed.