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It depends on the type of tree. Typically, late spring on the cusp of winter is ideal for trees about to emerge from dormancy and produce new buds. That said, late fall is ideal for certain deciduous trees prone to bleeding sap. Avoid trimming trees in early spring, when they’re prone to disease.

Leaving the tree stump and letting it rot is never a good idea, as this leads to insect infestations and other frustrations. Additionally, decomposing trunks are at risk for diseases that spread out to the remaining plants and trees in the yard, thus ruining your whole outdoor aesthetic. It's usually best to remove the stump at the same time you remove the tree.

Generally, you should prune around 20% of an apple tree’s growth—and never more than 30%. This means that if you have a severely overgrown tree, it can take a few seasons to prune it back enough to produce the healthiest fruit. 

If you’re dealing with a newly planted or juvenile tree, hold off on pruning beyond the initial shaping. Wait at least a couple of seasons into fruit production since pruning can increase the number of water sprouts and unproductive foliage.

Palm tree stumps can take as long as seven to ten years to rot naturally. Whereas some tree stumps rot within a year, palm trees tend to last longer due to their deep root networks. Chemical rotting (described above) can help speed the process up so your palm tree stumps rot in under two months.