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Leaving the tree stump and letting it rot is never a good idea, as this leads to insect infestations and other frustrations. Additionally, decomposing trunks are at risk for diseases that spread out to the remaining plants and trees in the yard, thus ruining your whole outdoor aesthetic. It's usually best to remove the stump at the same time you remove the tree.

There are four common ways to prune a tree correctly: crown thinning, crown reduction, crown raising, and crown cleaning. The method you choose depends on the purpose of pruning. However, making the correct cuts is a vital part of the process, regardless of your method. Pruning incorrectly can damage or even kill the tree. So, you may want to hire a professional tree-trimming company to tackle the task. 

In most cases, you should not use a pruning seal on trees after trimming. Applying a sealant can interfere with the tree's natural healing process, and it does not guarantee protection from pathogens. Instead of sealing the cut, the best practice is to support the tree's natural recovery by providing it with plenty of water and a dormant-style fertilizer. However, there are exceptions. Pruning seals may be recommended for very vulnerable species, like elm trees, in areas where dangerous diseases such as Dutch elm disease are prevalent. In these specific situations, the protection offered by a sealant can outweigh its downsides. For advice tailored to your situation, especially after cutting large branches, it is best to consult a local tree trimming professional.

Common signs that a tree is rotting include dead branches, a leaning trunk, peeling or cracked bark, leaf discoloration, and the presence of fungi. If you notice any of these signs, it’s best to hire an arborist near you to inspect your tree and determine if it can be saved or if it needs to come down.